TAP C3H in Amaranthus hypochondriacus

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus

Protein source: Phytozome (proteins from primary transcripts)


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

zf-CCCH
AP2
zf-C2H2
SRF-TF
two_or_more_Myb_DNA-binding

(Domain names are clickable)



List of proteins (51)

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namename additionClick button to show/hide sequence: Download sequence?
AHYPO_000114-RApacid=32845075 transcript=AHYPO_000114-RA locus=AHYPO_000114 ID=AHYPO_000114-RA.v1.0 annot-version=v1.0
AHYPO_000147-RApacid=32844905 transcript=AHYPO_000147-RA locus=AHYPO_000147 ID=AHYPO_000147-RA.v1.0 annot-version=v1.0
AHYPO_000656-RApacid=32833458 transcript=AHYPO_000656-RA locus=AHYPO_000656 ID=AHYPO_000656-RA.v1.0 annot-version=v1.0
AHYPO_001184-RApacid=32835624 transcript=AHYPO_001184-RA locus=AHYPO_001184 ID=AHYPO_001184-RA.v1.0 annot-version=v1.0
AHYPO_001667-RApacid=32846377 transcript=AHYPO_001667-RA locus=AHYPO_001667 ID=AHYPO_001667-RA.v1.0 annot-version=v1.0
AHYPO_001677-RApacid=32846380 transcript=AHYPO_001677-RA locus=AHYPO_001677 ID=AHYPO_001677-RA.v1.0 annot-version=v1.0
AHYPO_001712-RApacid=32846376 transcript=AHYPO_001712-RA locus=AHYPO_001712 ID=AHYPO_001712-RA.v1.0 annot-version=v1.0
AHYPO_001841-RApacid=32830783 transcript=AHYPO_001841-RA locus=AHYPO_001841 ID=AHYPO_001841-RA.v1.0 annot-version=v1.0
AHYPO_002455-RApacid=32840496 transcript=AHYPO_002455-RA locus=AHYPO_002455 ID=AHYPO_002455-RA.v1.0 annot-version=v1.0
AHYPO_002487-RApacid=32840493 transcript=AHYPO_002487-RA locus=AHYPO_002487 ID=AHYPO_002487-RA.v1.0 annot-version=v1.0
AHYPO_003879-RApacid=32833178 transcript=AHYPO_003879-RA locus=AHYPO_003879 ID=AHYPO_003879-RA.v1.0 annot-version=v1.0
AHYPO_005401-RApacid=32833962 transcript=AHYPO_005401-RA locus=AHYPO_005401 ID=AHYPO_005401-RA.v1.0 annot-version=v1.0
AHYPO_005651-RApacid=32836579 transcript=AHYPO_005651-RA locus=AHYPO_005651 ID=AHYPO_005651-RA.v1.0 annot-version=v1.0
AHYPO_006339-RApacid=32837599 transcript=AHYPO_006339-RA locus=AHYPO_006339 ID=AHYPO_006339-RA.v1.0 annot-version=v1.0
AHYPO_007690-RApacid=32830579 transcript=AHYPO_007690-RA locus=AHYPO_007690 ID=AHYPO_007690-RA.v1.0 annot-version=v1.0
AHYPO_008229-RApacid=32838106 transcript=AHYPO_008229-RA locus=AHYPO_008229 ID=AHYPO_008229-RA.v1.0 annot-version=v1.0
AHYPO_008494-RApacid=32835445 transcript=AHYPO_008494-RA locus=AHYPO_008494 ID=AHYPO_008494-RA.v1.0 annot-version=v1.0
AHYPO_008815-RApacid=32828249 transcript=AHYPO_008815-RA locus=AHYPO_008815 ID=AHYPO_008815-RA.v1.0 annot-version=v1.0
AHYPO_009655-RApacid=32845889 transcript=AHYPO_009655-RA locus=AHYPO_009655 ID=AHYPO_009655-RA.v1.0 annot-version=v1.0
AHYPO_009709-RApacid=32834389 transcript=AHYPO_009709-RA locus=AHYPO_009709 ID=AHYPO_009709-RA.v1.0 annot-version=v1.0
AHYPO_010011-RApacid=32839093 transcript=AHYPO_010011-RA locus=AHYPO_010011 ID=AHYPO_010011-RA.v1.0 annot-version=v1.0
AHYPO_010600-RApacid=32843882 transcript=AHYPO_010600-RA locus=AHYPO_010600 ID=AHYPO_010600-RA.v1.0 annot-version=v1.0
AHYPO_010635-RApacid=32844325 transcript=AHYPO_010635-RA locus=AHYPO_010635 ID=AHYPO_010635-RA.v1.0 annot-version=v1.0
AHYPO_010836-RApacid=32840705 transcript=AHYPO_010836-RA locus=AHYPO_010836 ID=AHYPO_010836-RA.v1.0 annot-version=v1.0
AHYPO_011085-RApacid=32846766 transcript=AHYPO_011085-RA locus=AHYPO_011085 ID=AHYPO_011085-RA.v1.0 annot-version=v1.0
AHYPO_011404-RApacid=32831750 transcript=AHYPO_011404-RA locus=AHYPO_011404 ID=AHYPO_011404-RA.v1.0 annot-version=v1.0
AHYPO_011857-RApacid=32834774 transcript=AHYPO_011857-RA locus=AHYPO_011857 ID=AHYPO_011857-RA.v1.0 annot-version=v1.0
AHYPO_012046-RApacid=32838024 transcript=AHYPO_012046-RA locus=AHYPO_012046 ID=AHYPO_012046-RA.v1.0 annot-version=v1.0
AHYPO_013185-RApacid=32842259 transcript=AHYPO_013185-RA locus=AHYPO_013185 ID=AHYPO_013185-RA.v1.0 annot-version=v1.0
AHYPO_013385-RApacid=32835830 transcript=AHYPO_013385-RA locus=AHYPO_013385 ID=AHYPO_013385-RA.v1.0 annot-version=v1.0
AHYPO_013688-RApacid=32825541 transcript=AHYPO_013688-RA locus=AHYPO_013688 ID=AHYPO_013688-RA.v1.0 annot-version=v1.0
AHYPO_013716-RApacid=32845335 transcript=AHYPO_013716-RA locus=AHYPO_013716 ID=AHYPO_013716-RA.v1.0 annot-version=v1.0
AHYPO_014314-RApacid=32840776 transcript=AHYPO_014314-RA locus=AHYPO_014314 ID=AHYPO_014314-RA.v1.0 annot-version=v1.0
AHYPO_014793-RApacid=32845676 transcript=AHYPO_014793-RA locus=AHYPO_014793 ID=AHYPO_014793-RA.v1.0 annot-version=v1.0
AHYPO_014805-RApacid=32834964 transcript=AHYPO_014805-RA locus=AHYPO_014805 ID=AHYPO_014805-RA.v1.0 annot-version=v1.0
AHYPO_014925-RApacid=32843234 transcript=AHYPO_014925-RA locus=AHYPO_014925 ID=AHYPO_014925-RA.v1.0 annot-version=v1.0
AHYPO_015011-RApacid=32841299 transcript=AHYPO_015011-RA locus=AHYPO_015011 ID=AHYPO_015011-RA.v1.0 annot-version=v1.0
AHYPO_016228-RApacid=32840065 transcript=AHYPO_016228-RA locus=AHYPO_016228 ID=AHYPO_016228-RA.v1.0 annot-version=v1.0
AHYPO_016636-RApacid=32831562 transcript=AHYPO_016636-RA locus=AHYPO_016636 ID=AHYPO_016636-RA.v1.0 annot-version=v1.0
AHYPO_016977-RApacid=32834745 transcript=AHYPO_016977-RA locus=AHYPO_016977 ID=AHYPO_016977-RA.v1.0 annot-version=v1.0
AHYPO_017032-RApacid=32838372 transcript=AHYPO_017032-RA locus=AHYPO_017032 ID=AHYPO_017032-RA.v1.0 annot-version=v1.0
AHYPO_017259-RApacid=32837482 transcript=AHYPO_017259-RA locus=AHYPO_017259 ID=AHYPO_017259-RA.v1.0 annot-version=v1.0
AHYPO_017534-RApacid=32825860 transcript=AHYPO_017534-RA locus=AHYPO_017534 ID=AHYPO_017534-RA.v1.0 annot-version=v1.0
AHYPO_019796-RApacid=32834713 transcript=AHYPO_019796-RA locus=AHYPO_019796 ID=AHYPO_019796-RA.v1.0 annot-version=v1.0
AHYPO_020025-RApacid=32839745 transcript=AHYPO_020025-RA locus=AHYPO_020025 ID=AHYPO_020025-RA.v1.0 annot-version=v1.0
AHYPO_020132-RApacid=32824805 transcript=AHYPO_020132-RA locus=AHYPO_020132 ID=AHYPO_020132-RA.v1.0 annot-version=v1.0
AHYPO_020452-RApacid=32840456 transcript=AHYPO_020452-RA locus=AHYPO_020452 ID=AHYPO_020452-RA.v1.0 annot-version=v1.0
AHYPO_020593-RApacid=32833020 transcript=AHYPO_020593-RA locus=AHYPO_020593 ID=AHYPO_020593-RA.v1.0 annot-version=v1.0
AHYPO_020631-RApacid=32842738 transcript=AHYPO_020631-RA locus=AHYPO_020631 ID=AHYPO_020631-RA.v1.0 annot-version=v1.0
AHYPO_021303-RApacid=32840313 transcript=AHYPO_021303-RA locus=AHYPO_021303 ID=AHYPO_021303-RA.v1.0 annot-version=v1.0
AHYPO_022401-RApacid=32831568 transcript=AHYPO_022401-RA locus=AHYPO_022401 ID=AHYPO_022401-RA.v1.0 annot-version=v1.0
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
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